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User:Michael Goodyear/Clades

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For this page keep align=left

Line label: |label1=A
Node label: |1=Node

{{clade |1={{clade |label1=A |1=Node }} }} displays as

A

Node

1. Simple bifid (sister relationship)

[edit]

Split line by:
|1=A |2=B

{{clade |1={{clade |1=leaf A |2=leaf B }} }} displays as

A

B

add |staten=dashed after leafn to make dashed line

leaf A

leaf B

{{Clade |1={{clade |label1='''A''' |1=[[Rhododendron subg. Rhododendron|''Rhododendron'']] |label2= |2=''[[Choniastrum]]'' }} }} displays as

2. Two layers

[edit]

{{Clade|title=Cladogram of Rhododendron (Goetsch ''et al.'' 2005) |1={{clade |label1='''A''' |1={{clade |1=[[Rhododendron subg. Rhododendron|''Rhododendron'']] |2=''[[Choniastrum]]'' }} |label2='''B''' |2=''[[Hymenanthes]]'' }} }} displays as

3. Multiple branches

[edit]

{{Clade|title=3. Cladogram of Rhododendron (Goetsch ''et al.'' 2005) |1={{clade |1={{clade |label1='''A''' |1={{clade |1=[[Rhododendron subg. Rhododendron|''Rhododendron'']] |2=''[[Choniastrum]]'' }} |label2='''B''' |2=''[[Hymenanthes]]'' }} |label2='''C''' |2= ''[[Azaleastrum]]'' }} }} displays as

Add label to initial prong with |label1=Label

4. Boxing with Cladogram, eg Rhododendron box

[edit]

To convert to Cladogram bracket between: note cladograms default to right

{{cladogram | title= {{anchor|Clad3}}Cladogram III: Tribes of subfamily Amaryllidoideae | align=left | cladogram={{clade|style=font-size:92%;line-height:100%;width:700px; }}}}

ie replaces initial {{clade|title= etc

  • Note: |align= must be outside |cladogram= - examples use Default, align=center, align = left

{{Cladogram|title= Cladogram of Rhododendron (Goetsch ''et al.'' 2005) |cladogram={{clade| style=width:{{{width|300}}}px; |align= left *Wrong* |1={{clade |1={{clade |1={{clade |label1='''A''' |1={{clade |1=[[Rhododendron subg. Rhododendron|''Rhododendron'']] |2=''[[Choniastrum]]'' }} |label2='''B''' |2=''[[Hymenanthes]]'' }} |label2='''C''' |2= ''[[Azaleastrum]]'' }} |2= ''Therorhodion'' }} }} }} displays as

Cladogram of Rhododendron (Goetsch et al. 2005)
Cladogram of Rhododendron (Goetsch et al. 2005)
Cladogram of Rhododendron (Goetsch et al. 2005)

Split lower line, e.g. (line 2) by nesting, e.g.
|label1= |1= |2={{clade |label1= |1= |label2= |2=

Tutorial

[edit]
  • 1. Frame
  • 2. Add Stem
Rhododendron
  • 3. Add first split
Rhododendron

A

B

  • 4. Divide first arm (A)
Rhododendron

A1

A2

B

  • 5. Further split A1
Rhododendron

A1.1

A1.2

A2

B

5. Narcissus Ranunculaceae

[edit]

|label1=Narcissus labels initial prong
Alternatively align with <center></center>


Subfamilies of Ranunculaceae
Ranuculaceae

Glaucidoideae

Hydrastidoideae

Coptoideae

Ranunculoideae

Thalictroideae


Cladogram of Ranunculales families[1]
Ranunculales

Eupteleaceae

Papaveraceae

Lardizabalaceae

Circaeasteraceae

Menispermaceae

Berberidaceae

Ranunculaceae


{{Cladogram|title= ''Narcissus'' Cladogram (Graham and Barrett 2004)<ref name=Graham/> |cladogram={{clade| style=width:{{{width|400}}}px; |align= left |label1=''Narcissus'' |1={{clade |label1='''I''' subgen. ''Hermione'' |1= ''Aurelia'', ''Serotinii'', ''Tazettae'' |label2='''VI''' subg. ''Narcissus'' |2={{clade |label1='''II''' |1=''Jonquillae'' |label2= |2={{clade |label1='''III''' |1=''Apodanthi'' |2={{clade |label1='''IV''' |1=''Bulbicodium'' |label2='''V''' |2=''Pseudonarcissi'', ''Ganymedes'', ''Narcissus'', ''Tapeinanthus'' }} }} }} }} }}}} displays as


Narcissus Cladogram (Graham and Barrett 2004)[2]
Narcissus
I subgen. Hermione

Aurelia, Serotinii, Tazettae

VI subg. Narcissus
II

Jonquillae

III

Apodanthi

IV

Bulbicodium

V

Pseudonarcissi, Ganymedes, Narcissus, Tapeinanthus

Cladogram of Sempervivoideae tribes
Sempervivoideae

Telephieae

Umbilicieae

Semperviveae

Aeoniae

Sedeae

6. Bracketing

[edit]

Step 1: Create cladogram with cladex instead of clade, in clades affexted


Step 2: Add bracket with bar

  • barbegin'n' = colour, where 'n'= leaf number (|n=) horizontal
  • bar'n' = vertical
  • barend = horizontal


Step 3: Add label with Barlabel

  • enclose in {{barlabel}}
  • add size=total number of leaves (4)
  • add at1=n, where n = leaf where label is places
  • add bar'n'= colour
  • add label'n'=label
  • add cladogram=
bryophytes

see Template:Vascular plant phylogeny Note: requires ENTIRE cladogram within Barlabel. Add style to barlabel And note use of tabs to format

compare: Lilianae and Lilioid monocots, using thickness


1. Phylogenetic tree reflecting relationships based on molecular phylogenetic evidence.[3] 2. The Dasypogonaceae represent an unplaced commelinid family, for which the order Dasypogonales has been suggested.[3]
3. "Lilioids": Lilioid monocots.
Lilianae
Lilioid monocots
notes
  • can be embedded inside larger cladogram
  • for headers and footers, enclose in {| |} - see Angiosperms
    • or use |title= and |caption = under {{cladogram, as in Phylogeny of Liliaceae, below

{{cladogram | title = | caption =

  • Notes placed as |caption = displayed at bottom
Phylogeny of Liliaceae and related families in Liliales and Asparagales
Phylogenetic tree reflecting relationships based on molecular phylogenetic evidence.[4] L denotes families that have traditionally been placed in Liliaceae, A those formerly placed in Amaryllidaceae, itself sometimes treated as part of the Liliaceae. Agavaceae has been included in either of the two.


basal
core

Useful to end with {{clear}} to avoid wraps

7. Illustrated (Nerine: es)

[edit]

[[File:Purple Agapantha.JPG|80px]]


8. Collapsed cladogram

[edit]

{| class="collapsible collapsed" style="width:100%; border:solid 1px #aaa" |- ! style="background:#F0F2F5" | Angiosperm classification |- | {{clade|style=font-size:80%;line-height:80% |1={{clade

9. Boxing with notes and colour

[edit]
clade monocots :
Cladogram: Phylogeny of the commelinids (APG IV)[5]

10. Sublabel

[edit]

Split long labels with |sublabel=

A A very long label

Rhododendron

Choniastrum

A

Rhododendron

A very long label

Choniastrum

Sandbox

[edit]
Blechnoideae

Blechnum

Woodwardia

Onoclea

Polypodiaceae

Didymochlaenoideae

Hypodematioideae

Dryopteridoideae

Lomariopsidoideae

Tectarioideae

Oleandroideae

Davallioideae

Polypodioideae

Polypodiales

Cystodiaceae

Saccolomataceae

Lonchitidaceae

Lindsaeaceae

Dennstaedtiaceae

Pteridaceae

Polypodiaceae

Aspleniaceae

Polypodiopsida

Equisetidae

Ophioglossidae

Marattiidae

Polypodiidae

Polypodiales

Saccolomatineae

Lindsaeineae

Pteridiineae

Dennstaedtiineae

Aspleniineae

Polypodiineae


Infrafamilial cladistic structure of Saxifragales
Saxifragales
Saxifragoids

Saxifraga

Heucheroids

Leptarrhena

Saniculiphyllum

Boykinia

Astilbe

Heuchera

Cascadia

Darmera

Peltoboykinia

Micranthes

Phylogenetic relationships of Theophrastoideae[6]


Crassulaceae

[edit]
Cladogram of Crassulaceae and Sempervivoideae clades and divisions[7]
Crassulaceae

Crassuloideae

Subfamily

Kalanchoideae

Subfamily
Telephium

Telephiae

Tribe
Umbiliceae

Umbilicus

Clade

Phedimus/Rhodiola

Clade
Tribe
Clade

Sempervivum/Jovibarba (Tribe Semperviveae)

Clade

Aeonium (Tribe Aeoniae)

Clade
Sedeae

Acre

Clade

Leucosedum

Clade
Tribe
Subfamily Sempervivoideae
Family
Note: Petrosedum clade is unplaced

Gymnosperms

[edit]
Infrafamilial cladistic structure of Saxifragales
Saxifragales
Saxifragoids

Saxifraga

Heucheroids

Leptarrhena

Saniculiphyllum

Boykinia

Astilbe

Heuchera

Cascadia

Darmera

Peltoboykinia

Micranthes


Phylogeny of Gymnosperms
Gymnosperms

Cycads

Ginkgoaceae

Pinaceae

Gnetales

Sciadopityaceae

Araucariaceae

Podocarpaceae

Taxaceae (including Cephalotaxaceae)

Cupressaceae s.l.

References

[edit]
  1. ^ Wang et al 2009.
  2. ^ Cite error: The named reference Graham was invoked but never defined (see the help page).
  3. ^ a b Chase & Reveal 2009.
  4. ^ Wilson & Morrison 2000, Rudall, P. J.; Stobart, K. L.; Hong, W-P.; Conran, J. G.; Furness, C. A.; Kite, G. C.; Chase, M. W. Consider the lilies: systematics of Liliales. pp. 347–359.
  5. ^ APG IV 2016.
  6. ^ Ståhl 2010, p. 20.
  7. ^ Messerschmid et al 2020.