User:C6541/molecules
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Molecules I have made and are currently in use unless otherwise noted.
I would appreciate a comment or concern by clicking here!
Molecule Images | |||
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3D Image | Article/Name | 2D Image | Article/Name |
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Dextrorphan 3D Molecule | ![]() |
Mexacarbate 2D Molecule |
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Noscapine 3D Molecule | ![]() |
Triclofos 2D Molecule |
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Papaverine 3D Molecule | ![]() |
Cyclohexylacetone 2D Molecule |
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Ethylphenidate 3D Molecule | ![]() |
2C-TFM Molecule |
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Apomorphine 3D Molecule | ![]() |
2C-B Molecule |
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1,3-Butanediol 3D Molecule | ![]() |
4-Methylephedrine 2D Molecule (mephedrone metabolite) |
Codeine 3D Molecule | ![]() |
Prenylamine 2D Molecule | |
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Lidocaine 3D Molecule | ![]() |
2CBCB-NBOMe 2D Molecule |
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4-Methyl-aminorex 3D Molecule | ![]() |
2C-C-NBOMe 2D Molecule |
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2C-T-2 3D Molecule | ![]() |
2CBFly-NBOMe 2D Molecule |
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LSA 3D Molecule | ![]() |
2C-TFM-NBOMe 2D Molecule |
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Levomethamphetamine 3D Molecule | ![]() |
25I-NBMD 2D Molecule |
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Propylhexedrine 3D Molecule | ![]() |
25I-NBF 2D Molecule |
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Lisdexamfetamine 3D Molecule | ![]() |
TFMFly 2D Molecule |
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Bromantane 3D Molecule | ![]() |
DSP-4 2D Molecule |
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Noscapine 3D Molecule | ![]() |
Vilazodone 2D Molecule |
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MDPV 3D Molecule | ![]() |
Norpropylhexedrine 2D Molecule |
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Benzphetamine 3D Molecule | ||
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Binospirone 3D Molecule | ||
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Oxymetazoline 3D Molecule | ||
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Desoxypipradrol 3D Molecule | ||
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4-MMC 3D Molecule | ||
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Cyclobenzaprine 3D Molecule | ||
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JWH-018 3D Molecule | ||
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Dihydromorphine 3D Molecule (ball and sticks) | ||
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Thebaine 3D Molecule (ball and sticks) | ||
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4-Methyl-AET 3D Molecule (ball and sticks) | ||
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ALD-52 3D Molecule (ball and sticks) | ||
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2C-C-NBOMe 3D Molecule (ball and sticks) | ||
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Phenibut 3D Molecule (ball and sticks) | ||
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Methoxetamine 3D Molecule (ball and sticks) | ||
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Norpropylhexedrine 3D Molecule |
How I make them |
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Process for creating the 3D molecules is as follows: |
1. Create 3D molecule in Ghemical running on Linux based on chemical 2D skeleton |
2. Use auto-tool to properly arrange the molecule |
3. Check molecular weight and empirical formula with Ghemical to ensure proper creation |
4. Using OpenBabel export in to a PDB (Protein Data Bank) file |
5. Save the project and close Ghemical |
6. Using QuteMol running through WINE open the PDB file and animate it |
7. Save the GIF file |
8. Upload the GIF animated molecule to Wikipedia Commmons and edit the drug article to display it. |
Process for creating the 2D molecules is as follows: |
1. Set BKChem settings following WikiProject Chemistry's structure drawing guidelines |
2. Draw molecule in BKChem |
3. Export molecule as SVG |