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BURP domain

From Wikipedia, the free encyclopedia
BURP
Identifiers
SymbolBURP
PfamPF03181
InterProIPR004873
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

In molecular biology, the BURP domain is a ~230-amino acid protein domain, which has been named for the four members of the group initially identified, BNM2, USP, RD22, and PG1beta. It is found in the C-terminal part of a number of plant cell wall proteins, which are defined not only by the BURP domain, but also by the overall similarity in their modular construction. The BURP domain proteins consists of either three or four modules: (i) an N-terminal hydrophobic domain - a presumptive transit peptide, joined to (ii) a short conserved segment or other short segment, (iii) an optional segment consisting of repeated units which is unique to each member, and (iv) the C-terminal BURP domain. Although the BURP domain proteins share primary structural features, their expression patterns and the conditions under which they are expressed differ. The presence of the conserved BURP domain in diverse plant proteins suggests an important role for this domain.[1] It is possible that the BURP domain represents a general motif for localization of proteins within the cell wall matrix. The other structural domains associated with the BURP domain may specify other target sites for intermolecular interactions.[2]

Some proteins known to contain a BURP domain are listed below:[1][2][3]

References

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  1. ^ a b Hattori J, Boutilier KA, van Lookeren Campagne MM, Miki BL (September 1998). "A conserved BURP domain defines a novel group of plant proteins with unusual primary structures". Mol. Gen. Genet. 259 (4): 424–8. doi:10.1007/s004380050832. PMID 9790599. S2CID 21359007.
  2. ^ a b Batchelor AK, Boutilier K, Miller SS, Hattori J, Bowman LA, Hu M, Lantin S, Johnson DA, Miki BL (August 2002). "SCB1, a BURP-domain protein gene, from developing soybean seed coats". Planta. 215 (4): 523–32. Bibcode:2002Plant.215..523B. doi:10.1007/s00425-002-0798-1. PMID 12172833. S2CID 19185882.
  3. ^ Wang A, Xia Q, Xie W, Datla R, Selvaraj G (November 2003). "The classical Ubisch bodies carry a sporophytically produced structural protein (RAFTIN) that is essential for pollen development". Proc. Natl. Acad. Sci. U.S.A. 100 (24): 14487–92. Bibcode:2003PNAS..10014487W. doi:10.1073/pnas.2231254100. PMC 283618. PMID 14612572.
This article incorporates text from the public domain Pfam and InterPro: IPR004873