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Anaerolineaceae

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Anaerolineaceae
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Chloroflexota
Class: Anaerolineae
Order: Anaerolineales
Family: Anaerolineaceae
Yamada et al. 2006[1][2][3]
Genera[4]

Anaerolineaceae is a family of bacteria from the order of Anaerolineales.[1][4][5][6] Anaerolineaceae bacteria occur in marine sediments.[7] There are a total of twelve genera in this family, most of which only encompass one species.[8] All known members of the family are Gram-negative and non-motile. They also do not form bacterial spores and are either mesophilic or thermophilic obligate anaerobes. It is also known that all species in this family are chemoheterotrophs.[9]

History

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The first species discovered in the family Anaerolineaceae was the species Anaerolinea thermophila, with a report on the matter written by Yuji Sekiguchi et. al. in 2003.[10] It was isolated alongside the bacterial species Caldilinea aerophila, a facultative anaerobe. The discovery of these two specimens prompted the addition of a new subphylum in bacterial taxonomy.[10]

Phylogeny

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The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[11]

16S rRNA based LTP_06_2022[12][13][14] 120 single copy marker proteins based GTDB 08-RS214[15][16][17]
Aggregatilineales
Aggregatilineaceae

Aggregatilinea Nakahara et al. 2019

"Phototrophicaceae"

"Phototrophicus" Zheng et al. 2022

Anaerolineales
EnvOPS12

"Desulfolinea" Van Vliet et al. 2020

Anaerolineaceae

"Brevefilum" corrig. McIlroy et al. 2017

Pelolinea Imachi et al. 2014

Flexilinea Sun et al. 2016

Ornatilinea Podosokorskaya et al. 2013

Levilinea Yamada et al. 2006

Leptolinea Yamada et al. 2006

Anaerolinea Sekiguchi et al. 2003

Longilinea Yamada et al. 2007

Bellilinea Yamada et al. 2007

"Thermanaerothrix" Gregoire et al. 2011

See also

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References

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  1. ^ a b Parker, Charles Thomas; Wigley, Sarah; Garrity, George M; Taylor, Dorothea (2009). Parker, Charles Thomas; Garrity, George M. (eds.). "Nomenclature Abstract for Anaerolineaceae Yamada et al. 2006". The NamesforLife Abstracts. doi:10.1601/nm.576 (inactive 1 November 2024).{{cite journal}}: CS1 maint: DOI inactive as of November 2024 (link)
  2. ^ a b Parte, A.C. "Anaerolineaceae". LPSN.
  3. ^ Rada, Elena C. (2015). Biological Treatment of Solid Waste: Enhancing Sustainability. CRC Press. ISBN 9781771882804.
  4. ^ a b "Anaerolineaceae". www.uniprot.org.
  5. ^ Satyanarayana, Tulasi; Littlechild, Jennifer; Kawarabayasi, Yutaka (2013). Thermophilic Microbes in Environmental and Industrial Biotechnology: Biotechnology of Thermophiles. Springer Science & Business Media. ISBN 9789400758995.
  6. ^ Ismail, Wael A.; Hamme, Jonathan D. Van; Kilbane, John J.; Gu, Ji-Dong (2017). Petroleum Microbial Biotechnology: Challenges and Prospects. Frontiers Media SA. ISBN 9782889452569.
  7. ^ Teske, Andreas; Biddle, Jennifer F.; Edgcomb, Virginia P.; Schippers, Axel (2015). Deep Subsurface Microbiology. Frontiers Media SA. ISBN 9782889195367.
  8. ^ "Anaerolineaceae". www.uniprot.org. Retrieved 2022-04-15.
  9. ^ "Anaerolineaceae". ResearchGate. Retrieved 2022-04-15.
  10. ^ a b Sekiguchi, Yuji; Yamada, Takeshi; Hanada, Satoshi; Ohashi, Akiyoshi; Harada, Hideki; Kamagata, Yoichi (November 2003). "Anaerolinea thermophila gen. nov., sp. nov. and Caldilinea aerophila gen. nov., sp. nov., novel filamentous thermophiles that represent a previously uncultured lineage of the domain Bacteria at the subphylum level". International Journal of Systematic and Evolutionary Microbiology. 53 (Pt 6): 1843–1851. doi:10.1099/ijs.0.02699-0. ISSN 1466-5026. PMID 14657113.
  11. ^ Sayers; et al. "Chloroflexi". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2014-03-20.
  12. ^ "The LTP". Retrieved 10 May 2023.
  13. ^ "LTP_all tree in newick format". Retrieved 10 May 2023.
  14. ^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
  15. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  16. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  17. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
  18. ^ a b c Yamada, T.; Sekiguchi, Y.; Hanada, S.; Imachi, H.; Ohashi, A.; Harada, H.; Kamagata, Y. (2006). "Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. And Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi". International Journal of Systematic and Evolutionary Microbiology. 56 (6): 1331–1340. doi:10.1099/ijs.0.64169-0. PMID 16738111.
  19. ^ Sekiguchi, Y.; Yamada, T.; Hanada, S.; Ohashi, A.; Harada, H.; Kamagata, Y. (2003). "Anaerolinea thermophila gen. nov., sp. nov. And Caldilinea aerophila gen. nov., sp. nov., novel filamentous thermophiles that represent a previously uncultured lineage of the domain Bacteria at the subphylum level". International Journal of Systematic and Evolutionary Microbiology. 53 (6): 1843–1851. doi:10.1099/ijs.0.02699-0. PMID 14657113.
  20. ^ Yamada, T.; Imachi, H.; Ohashi, A.; Harada, H.; Hanada, S.; Kamagata, Y.; Sekiguchi, Y. (2007). "Bellilinea caldifistulae gen. nov., sp. nov. And Longilinea arvoryzae gen. nov., sp. nov., strictly anaerobic, filamentous bacteria of the phylum Chloroflexi isolated from methanogenic propionate-degrading consortia". International Journal of Systematic and Evolutionary Microbiology. 57 (10): 2299–2306. doi:10.1099/ijs.0.65098-0. PMID 17911301.

Further reading

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