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Sigma-1 receptor

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SIGMAR1
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesSIGMAR1, ALS16, OPRS1, SIG-1R, SR-BP, SR-BP1, SRBP, hSigmaR1, sigma1R, DSMA2, sigma non-opioid intracellular receptor 1
External IDsOMIM: 601978; MGI: 1195268; HomoloGene: 39965; GeneCards: SIGMAR1; OMA:SIGMAR1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez

10280

18391

Ensembl

ENSG00000147955

ENSMUSG00000036078

UniProt

Q99720

O55242

RefSeq (mRNA)
RefSeq (protein)
Location (UCSC)Chr 9: 34.63 – 34.64 MbChr 4: 41.74 – 41.76 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

The sigma-1 receptor (σ1R), one of two sigma receptor subtypes, is a chaperone protein at the endoplasmic reticulum (ER) that modulates calcium signaling through the IP3 receptor.[5] In humans, the σ1 receptor is encoded by the SIGMAR1 gene.[6][7]

The σ1 receptor is a transmembrane protein expressed in many different tissue types. It is particularly concentrated in certain regions of the central nervous system.[8] It has been implicated in several phenomena, including cardiovascular function, schizophrenia, clinical depression, the effects of cocaine abuse, bipolar disorder, and cancer.[9][10] Much is known about the binding affinity of hundreds of synthetic compounds to the σ1 receptor.

An endogenous ligand for the σ1 receptor has yet to be conclusively identified, but tryptaminergic trace amines and neuroactive steroids have been found to activate the receptor.[11] Especially progesterone, but also testosterone, pregnenolone sulfate, N,N-dimethyltryptamine (DMT) and dehydroepiandrosterone sulfate (DHEA-S) bind to the σ1 receptor.[12]

Characteristics

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The σ1 receptor is defined by its unique pharmacological profile. In 1976 Martin reported that the effects of N-allylnormetazocine (SKF-10,047) could not be due to activity at the μ and κ receptors (named from the first letter of their selective ligands morphine and ketazocine, respectively) and a new type of opioid receptor was proposed; σ (from the first letter of SKF-10,047).[13] The opioid classification was eventually dropped however resulting from it not possessing the canonical opioid G-protein coupled receptor structure and the receptor was later referred to as simply the σ1 receptor. It was found to have affinity for the (+)-stereoisomers of several benzomorphans (e.g., (+)-pentazocine and (+)-cyclazocine), as well as various structurally and pharmacologically distinct psychoactive chemicals such as haloperidol (which permanently blocks this receptor[14]) and cocaine, and neuroactive steroids like progesterone.[15] Pharmacological studies with σ1 agonists often follow a bell-shaped dose-response curve.[16] Thus care should be taken when designing experiments and choosing doses of ligands.

Structure

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The mammalian σ1 receptor is an integral membrane protein with 223 amino acids.[17] It shows no homology to other mammalian proteins but strikingly shares 30% sequence identity and 69% similarity with the ERG2 gene product of yeast, which is a C8-C7 sterol isomerase in the ergosterol biosynthetic pathway. Hydropathy analysis of the σ1 receptor indicates three hydrophobic regions.[18] A crystal structure of the σ1 receptor was published in 2016.[19]

Functions

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A variety of specific physiological functions have been attributed to the σ1 receptor. Chief among these are modulation of Ca2+ release, modulation of cardiac myocyte contractility, and inhibition of voltage gated K+ channels.[20] The reasons for these effects are not well understood, even though σ1 receptors have been linked circumstantially to a wide variety of signal transduction pathways. Links between σ1 receptors and G-proteins have been suggested such as σ1 receptor antagonists showing GTP-sensitive high-affinity binding;[21] there is also, however, some evidence against a G-protein coupled hypothesis.[22] The σ1 receptor has been shown to appear in a complex with voltage gated K+ channels (Kv1.4 and Kv1.5), leading to the idea that σ1 receptors are auxiliary subunits.[23] σ1 receptors apparently co-localize with IP3 receptors on the endoplasmic reticulum[24] where they may be involved in preventing endoplasmic reticulum stress in neurodegenerative diseases.[25] Also, σ1 receptors have been shown to appear in galactoceramide enriched domains at the endoplasmic reticulum of mature oligodendrocytes.[26] The wide scope and effect of ligand binding on σ1 receptors has led some to believe that σ1 receptors are intracellular signal transduction amplifiers.[15]

Recently, σ1R has been implicated in autophagosome formation [27] and maturation.[28] Autophagy is a broad homeostatic, metabolic, cytoplasmic quality control, and metabolic process affecting many functions in the cell.[29] σ1R is targeted by the nsp6 protein of SARS-CoV-2[30][27] to inhibit autophagosome formation [27] as a process competing with the coronavirus for cellular endomembranes that the virus needs for its own replication. This along with the observed beneficial effects of sigma-1 receptor agonist and SSRI fluvoxamine in patients with SARS-COV-2 infection[31] has led to the hypothesis that the sigma-1 receptor could be a target for the treatment of SARS-COV-2.[32]

There has been much interest in the sigma-1 receptor and its role in age-related neurodegenerative diseases such as Alzheimer's disease. During healthy ageing, the density of sigma-1 receptors has been to increase. However, in diseases such as Alzheimer's disease, there appears to be a reduction in sigma-1 receptor expression. It has been suggested that targeting the sigma-1 receptor along with other receptors could increase neuron survival and function in neurodegenerative disease.[16] The activation of autophagy has also been suggested as a downstream mechanism linked to sigma-1 receptor activation.[33]

Knockout mice

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σ1 receptor knockout mice were created in 2003 to study the effects of endogenous DMT. Strangely, the mice demonstrated no overt phenotype.[34] As expected, however, they did lack locomotor response to the σ ligand (+)-SKF-10,047 and displayed reduced response to formalin induced pain. Speculation has focused on the ability of other receptors in the σ family (e.g., σ2, with similar binding properties) to compensate for the lack of σ1 receptor.[34]

Clinical significance

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Mutations in the SIGMAR1 gene have been associated with distal spinal muscular atrophy type 2.[35]

Ligands

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The following ligands have high affinity for the σ1 receptor and possess high binding selectivity over the subtype σ2:[36]

Agonists:

Antagonists:

  • Sertraline
  • S1RA
  • FTC-146
  • 1-benzyl-6′-methoxy-6′,7′-dihydrospiro[piperidine-4,4′-thieno[3.2-c]pyran]: putative antagonist, selective against 5-HT1A, 5-HT6, 5-HT7, α1A and α2 adrenergic, and NMDA receptors[39]
  • NE-100

Positive allosteric modulators (PAMs):

Uncategorized:

  • Selegiline
  • D-Deprenyl
  • Clorgiline
  • 4-IPBS
  • PD 144418
  • Spipethiane
  • RHL-033
  • 3-[[1-[(4-chlorophenyl)methyl]-4-piperidyl]methyl]-1,3-benzoxazol-2-one: very high affinity and subtype selectivity[42]
  • 1'-[(4-fluorophenyl)methyl]spiro[1H-isobenzofuran-3,4'-piperidine][43]
  • 1'-benzyl-6-methoxy-1-phenyl-spiro[6H-furo[3,4-c]pyrazole-4,4'-piperidine][44]
  • (−)-(S)-4-methyl-1-[2-(4-chlorophenoxy)-1-methylethyl]piperidine[45]

Agents exist that have high σ1 affinity but either lack subtype selectivity or have high affinity at other binding sites, thus being more or less dirty/multifunctional, like haloperidol. Furthermore, there is a wide range of agents with an at least moderate σ1 involvement in their binding profile.[46][47][36]

See also

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References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000147955 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000036078 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Hayashi T, Su TP (November 2007). "Sigma-1 receptor chaperones at the ER-mitochondrion interface regulate Ca(2+) signaling and cell survival". Cell. 131 (3): 596–610. doi:10.1016/j.cell.2007.08.036. PMID 17981125. S2CID 18885068.
  6. ^ Kekuda R, Prasad PD, Fei YJ, Leibach FH, Ganapathy V (December 1996). "Cloning and functional expression of the human type 1 sigma receptor (hSigmaR1)". Biochemical and Biophysical Research Communications. 229 (2): 553–558. doi:10.1006/bbrc.1996.1842. PMID 8954936.
  7. ^ Prasad PD, Li HW, Fei YJ, Ganapathy ME, Fujita T, Plumley LH, et al. (February 1998). "Exon-intron structure, analysis of promoter region, and chromosomal localization of the human type 1 sigma receptor gene". Journal of Neurochemistry. 70 (2): 443–451. doi:10.1046/j.1471-4159.1998.70020443.x. PMID 9453537. S2CID 22305479.
  8. ^ Weissman AD, Su TP, Hedreen JC, London ED (October 1988). "Sigma receptors in post-mortem human brains". The Journal of Pharmacology and Experimental Therapeutics. 247 (1): 29–33. PMID 2845055.
  9. ^ Guitart X, Codony X, Monroy X (July 2004). "Sigma receptors: biology and therapeutic potential". Psychopharmacology. 174 (3): 301–319. doi:10.1007/s00213-004-1920-9. PMID 15197533. S2CID 23606712.
  10. ^ Zhang H, Cuevas J (June 2005). "sigma Receptor activation blocks potassium channels and depresses neuroexcitability in rat intracardiac neurons". The Journal of Pharmacology and Experimental Therapeutics. 313 (3): 1387–1396. doi:10.1124/jpet.105.084152. PMID 15764734. S2CID 9704436.
  11. ^ Fontanilla D, Johannessen M, Hajipour AR, Cozzi NV, Jackson MB, Ruoho AE (February 2009). "The hallucinogen N,N-dimethyltryptamine (DMT) is an endogenous sigma-1 receptor regulator". Science. 323 (5916): 934–937. Bibcode:2009Sci...323..934F. doi:10.1126/science.1166127. PMC 2947205. PMID 19213917.
  12. ^ Hayashi T, Su TP (2004). "Sigma-1 receptor ligands: potential in the treatment of neuropsychiatric disorders". CNS Drugs. 18 (5): 269–284. doi:10.2165/00023210-200418050-00001. PMID 15089113. S2CID 72726251.
  13. ^ Martin WR, Eades CG, Thompson JA, Huppler RE, Gilbert PE (June 1976). "The effects of morphine- and nalorphine- like drugs in the nondependent and morphine-dependent chronic spinal dog". The Journal of Pharmacology and Experimental Therapeutics. 197 (3): 517–532. PMID 945347.
  14. ^ Cobos EJ, del Pozo E, Baeyens JM (August 2007). "Irreversible blockade of sigma-1 receptors by haloperidol and its metabolites in guinea pig brain and SH-SY5Y human neuroblastoma cells". Journal of Neurochemistry. 102 (3): 812–825. doi:10.1111/j.1471-4159.2007.04533.x. PMID 17419803.
  15. ^ a b Su TP, Hayashi T (October 2003). "Understanding the molecular mechanism of sigma-1 receptors: towards a hypothesis that sigma-1 receptors are intracellular amplifiers for signal transduction". Current Medicinal Chemistry. 10 (20): 2073–2080. doi:10.2174/0929867033456783. PMID 12871086.
  16. ^ a b Brimson JM, Brimson S, Chomchoei C, Tencomnao T (October 2020). "Using sigma-ligands as part of a multi-receptor approach to target diseases of the brain". Expert Opinion on Therapeutic Targets. 24 (10): 1009–1028. doi:10.1080/14728222.2020.1805435. PMID 32746649. S2CID 225218231.
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  19. ^ Schmidt HR, Zheng S, Gurpinar E, Koehl A, Manglik A, Kruse AC (April 2016). "Crystal structure of the human σ1 receptor". Nature. 532 (7600): 527–530. Bibcode:2016Natur.532..527S. doi:10.1038/nature17391. PMC 5550834. PMID 27042935.
  20. ^ Monassier L, Bousquet P (February 2002). "Sigma receptors: from discovery to highlights of their implications in the cardiovascular system". Fundamental & Clinical Pharmacology. 16 (1): 1–8. doi:10.1046/j.1472-8206.2002.00063.x. PMID 11903506. S2CID 27932111.
  21. ^ Brimson JM, Brown CA, Safrany ST (September 2011). "Antagonists show GTP-sensitive high-affinity binding to the sigma-1 receptor". British Journal of Pharmacology. 164 (2b): 772–780. doi:10.1111/j.1476-5381.2011.01417.x. PMC 3188898. PMID 21486275.
  22. ^ Hong W, Werling LL (November 2000). "Evidence that the sigma(1) receptor is not directly coupled to G proteins". European Journal of Pharmacology. 408 (2): 117–125. doi:10.1016/S0014-2999(00)00774-3. PMID 11080517.
  23. ^ Lupardus PJ, Wilke RA, Aydar E, Palmer CP, Chen Y, Ruoho AE, et al. (August 2000). "Membrane-delimited coupling between sigma receptors and K+ channels in rat neurohypophysial terminals requires neither G-protein nor ATP". The Journal of Physiology. 526 (3): 527–539. doi:10.1111/j.1469-7793.2000.00527.x. PMC 2270035. PMID 10922005.
  24. ^ Hayashi T, Su TP (January 2001). "Regulating ankyrin dynamics: Roles of sigma-1 receptors". Proceedings of the National Academy of Sciences of the United States of America. 98 (2): 491–496. doi:10.1073/pnas.021413698. PMC 14614. PMID 11149946.
  25. ^ a b Brimson JM, Safrany ST, Qassam H, Tencomnao T (August 2018). "Dipentylammonium Binds to the Sigma-1 Receptor and Protects Against Glutamate Toxicity, Attenuates Dopamine Toxicity and Potentiates Neurite Outgrowth in Various Cultured Cell Lines". Neurotoxicity Research. 34 (2): 263–272. doi:10.1007/s12640-018-9883-5. PMID 29589276. S2CID 4378593.
  26. ^ Hayashi T, Su TP (October 2004). "Sigma-1 receptors at galactosylceramide-enriched lipid microdomains regulate oligodendrocyte differentiation". Proceedings of the National Academy of Sciences of the United States of America. 101 (41): 14949–14954. Bibcode:2004PNAS..10114949H. doi:10.1073/pnas.0402890101. PMC 522002. PMID 15466698.
  27. ^ a b c Kumar S, Javed R, Mudd M, Pallikkuth S, Lidke KA, Jain A, et al. (November 2021). "Mammalian hybrid pre-autophagosomal structure HyPAS generates autophagosomes". Cell. 184 (24): 5950–5969.e22. doi:10.1016/j.cell.2021.10.017. PMC 8616855. PMID 34741801.
  28. ^ Yang H, Shen H, Li J, Guo LW (September 2019). "SIGMAR1/Sigma-1 receptor ablation impairs autophagosome clearance". Autophagy. 15 (9): 1539–1557. doi:10.1080/15548627.2019.1586248. PMC 6693456. PMID 30871407.
  29. ^ Levine B, Kroemer G (January 2019). "Biological Functions of Autophagy Genes: A Disease Perspective". Cell. 176 (1–2): 11–42. doi:10.1016/j.cell.2018.09.048. PMC 6347410. PMID 30633901.
  30. ^ Gordon DE, Jang GM, Bouhaddou M, Xu J, Obernier K, White KM, et al. (July 2020). "A SARS-CoV-2 protein interaction map reveals targets for drug repurposing". Nature. 583 (7816): 459–468. Bibcode:2020Natur.583..459G. doi:10.1038/s41586-020-2286-9. PMC 7431030. PMID 32353859.
  31. ^ Lenze EJ, Mattar C, Zorumski CF, Stevens A, Schweiger J, Nicol GE, et al. (December 2020). "Fluvoxamine vs Placebo and Clinical Deterioration in Outpatients With Symptomatic COVID-19: A Randomized Clinical Trial". JAMA. 324 (22): 2292–2300. doi:10.1001/jama.2020.22760. PMC 7662481. PMID 33180097.
  32. ^ Brimson JM, Prasanth MI, Malar DS, Brimson S, Thitilertdecha P, Tencomnao T (June 2021). "Drugs that offer the potential to reduce hospitalization and mortality from SARS-CoV-2 infection: The possible role of the sigma-1 receptor and autophagy". Expert Opinion on Therapeutic Targets. 25 (6): 435–449. doi:10.1080/14728222.2021.1952987. PMC 8290373. PMID 34236922.
  33. ^ Prasanth MI, Malar DS, Tencomnao T, Brimson JM (May 2021). "The emerging role of the sigma-1 receptor in autophagy: hand-in-hand targets for the treatment of Alzheimer's". Expert Opinion on Therapeutic Targets. 25 (5): 401–414. doi:10.1080/14728222.2021.1939681. PMID 34110944. S2CID 235402107.
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  37. ^ Brimson JM, Akula KK, Abbas H, Ferry DR, Kulkarni SK, Russell ST, et al. (June 2020). "Simple ammonium salts acting on sigma-1 receptors yield potential treatments for cancer and depression". Scientific Reports. 10 (1): 9251. Bibcode:2020NatSR..10.9251B. doi:10.1038/s41598-020-65849-6. PMC 7280195. PMID 32514120.
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  39. ^ Oberdorf C, Schepmann D, Vela JM, Diaz JL, Holenz J, Wünsch B (October 2008). "Thiophene bioisosteres of spirocyclic sigma receptor ligands. 1. N-substituted spiro[piperidine-4,4'-thieno[3,2-c]pyrans]". Journal of Medicinal Chemistry. 51 (20): 6531–6537. doi:10.1021/jm8007739. PMID 18816044.
  40. ^ Vavers E, Zvejniece L, Veinberg G, Svalbe B, Domracheva I, Vilskersts R, et al. (2015). "Novel positive allosteric modulators of sigma-1 receptor". SpringerPlus. 4 (Suppl 1): 51. doi:10.1186/2193-1801-4-S1-P51. PMC 4797911. The R-configuration enantiomers of methylphenylpiracetam are more active positive allosteric modulators of Sigma-1 receptor than S-configuration enantiomers.
  41. ^ Wang Y, Guo L, Jiang HF, Zheng LT, Zhang A, Zhen XC (May 2016). "Allosteric Modulation of Sigma-1 Receptors Elicits Rapid Antidepressant Activity". CNS Neuroscience & Therapeutics. 22 (5): 368–377. doi:10.1111/cns.12502. PMC 6492821. PMID 26854125.
  42. ^ Zampieri D, Grazia Mamolo M, Laurini E, Zanette C, Florio C, Collina S, et al. (January 2009). "Substituted benzo[d]oxazol-2(3H)-one derivatives with preference for the sigma1 binding site". European Journal of Medicinal Chemistry. 44 (1): 124–130. doi:10.1016/j.ejmech.2008.03.011. PMID 18440098.
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  44. ^ Schläger T, Schepmann D, Würthwein EU, Wünsch B (March 2008). "Synthesis and structure-affinity relationships of novel spirocyclic sigma receptor ligands with furopyrazole structure". Bioorganic & Medicinal Chemistry. 16 (6): 2992–3001. doi:10.1016/j.bmc.2007.12.045. PMID 18221879.
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  46. ^ EP 1787679, Buschman HH, "Use of compounds binding to the sigma receptor for the treatment of diabetes-associated pain", published 23 May 2007, assigned to Esteve Pharmaceuticals SA 
  47. ^ Lee IT, Chen S, Schetz JA (January 2008). "An unambiguous assay for the cloned human sigma1 receptor reveals high affinity interactions with dopamine D4 receptor selective compounds and a distinct structure-affinity relationship for butyrophenones". European Journal of Pharmacology. 578 (2–3): 123–136. doi:10.1016/j.ejphar.2007.09.020. PMC 2963108. PMID 17961544.
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