File:Sequence space for Stordalen Mire viruses.jpg
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Summary
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English: Relating Stordalen Mire viruses to known viral sequence space. (A) Clustering of recovered vOTUs with all RefSeq (v 75) viral genomes or genome fragments with genetic connectivity to these data. Shapes indicate major viral families, and RefSeq sequences only indirectly linked to these data are in gray. The contig numbers are shown within circles. Each node is depicted as a different shape, representing viruses belonging to Myoviridae (rectangle), Podoviridae (diamond), Siphoviridae (hexagon), or uncharacterized viruses (triangle) and viral contigs (circle). Edges (lines) between nodes indicate statistically weighted pairwise similarity scores of ≥1. Color denotes habitat of origin, with “other” encompassing wastewater, sewage, feces, and plant material. Contig-encompassing viral clusters are encircled by a solid line. (B) The pie chart represents the number of the Stordalen Mire (SM) viral proteins that are recovered by protein clusters (PCs) (yellow and red) and singletons (gray). (C) Percentage of vOTUs that link to those from palsa, bog, and fen as well as RefSeq viruses. |
| Date | |
| Source | [1] doi:10.1128/mSystems.00076-18 |
| Author | Gareth Trubl, Ho Bin Jang, Simon Roux, Joanne B. Emerson, Natalie Solonenko, Dean R. Vik, Lindsey Solden, Jared Ellenbogen, Alexander T. Runyon, Benjamin Bolduc, Ben J. Woodcroft, Scott R. Saleska, Gene W. Tyson, Kelly C. Wrighton, Matthew B. Sullivan and Virginia I. Rich |
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| Date/Time | Thumbnail | Dimensions | User | Comment | |
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| current | 05:21, 5 June 2021 | | 696 × 649 (123 KB) | Epipelagic | Uploaded a work by Gareth Trubl, Ho Bin Jang, Simon Roux, Joanne B. Emerson, Natalie Solonenko, Dean R. Vik, Lindsey Solden, Jared Ellenbogen, Alexander T. Runyon, Benjamin Bolduc, Ben J. Woodcroft, Scott R. Saleska, Gene W. Tyson, Kelly C. Wrighton, Matthew B. Sullivan and Virginia I. Rich from [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6172770/#B1] {{doi|10.1128/mSystems.00076-18}} with UploadWizard |
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